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A Necroptosis-Related Prognostic Model of Uveal Melanoma Was Constructed by Single-Cell Sequencing Analysis and Weighted Co-Expression Network Analysis Based on Public Databases

Front Immunol. 2022-02; 
Jiaheng Xie, Liang Chen, Qikai Tang, Wei Wei, Yuan Cao, Chuyan Wu, Jing Hang, Kai Zhang, Jingping Shi, Ming Wang
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Custom DNA/RNA Oligos … The primers were synthesized by Genscript Biotechnology Inc (Nanjing, China), the sequence of which were listed in Supplementary Table S2 . All data were presented as the means ± … Get A Quote

摘要

background: Uveal melanoma(UVM) is the most common intraocular malignancy and has a poor prognosis. The clinical significance of necroptosis(NCPS) in UVM is unclear. methods: We first identified necroptosis genes in UVM by single-cell analysis of the GSE139829 dataset from the GEO database and weighted co-expression network analysis of TCGA data. COX regression and Lasso regression were used to construct the prognostic model. Then survival analysis, immune microenvironment analysis, and mutation analysis were carried out. Finally, cell experiments were performed to verify the role of ITPA in UVM. results: By necroptosis-related prognostic model, UVM patients in both TCGA and GEO cohorts could be classified as h... More

关键词

ITPA, bioinformatics, necroptosis, prognostic model, uveal melanoma